Sitemap
A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Pages
Posts
Future Blog Post
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Blog Post number 4
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 3
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 2
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 1
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
portfolio
Portfolio item number 1
Short description of portfolio item number 1
Portfolio item number 2
Short description of portfolio item number 2
publications
Shared data science infrastructure for genomics data
Published in BMC Bioinformatics, 2019
This paper discusses Boag, a shared data science infrastructure for efficiently processing and parsing large genomics data repositories.
Recommended citation: Bagheri, H., Muppirala, U., Masonbrink, R.E. et al. Shared data science infrastructure for genomics data. BMC Bioinformatics 20, 436 (2019). https://doi.org/10.1186/s12859-019-2967-2 https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-2967-2
Detecting and correcting misclassified sequences in the large-scale public databases
Published in Bioinformatics, 2020
This paper presents a heuristic method to detect and correct potentially misclassified taxonomic assignments in public databases.
Recommended citation: Hamid Bagheri, Andrew J Severin, Hridesh Rajan, Detecting and correcting misclassified sequences in the large-scale public databases, Bioinformatics, Volume 36, Issue 18, September 2020, Pages 4699–4705, https://doi.org/10.1093/bioinformatics/btaa586 https://academic.oup.com/bioinformatics/article/36/18/4699/5862012
Characterizing Bugs in Python and R Data Analytics Programs
Published in arXiv, 2023
This paper presents a comprehensive study of bugs in Python and R data analytics tasks based on Stack Overflow posts, GitHub commits, and issues.
Recommended citation: Shibbir Ahmed, Mohammad Wardat, Hamid Bagheri, Breno Dantas Cruz, Hridesh Rajan, Characterizing Bugs in Python and R Data Analytics Programs, arXiv:2306.08632 [cs.SE], https://doi.org/10.48550/arXiv.2306.08632 https://arxiv.org/abs/2306.08632
talks
Talk 1 on Relevant Topic in Your Field
Published:
This is a description of your talk, which is a markdown files that can be all markdown-ified like any other post. Yay markdown!
Conference Proceeding talk 3 on Relevant Topic in Your Field
Published:
This is a description of your conference proceedings talk, note the different field in type. You can put anything in this field.
teaching
Teaching experience 1
Undergraduate course, University 1, Department, 2014
This is a description of a teaching experience. You can use markdown like any other post.
Teaching experience 2
Workshop, University 1, Department, 2015
This is a description of a teaching experience. You can use markdown like any other post.